iScan (Illumina)


Service information

Illumina microarrays are a robust system that allow us to find variants in simple nucleotide polymorphisms (SNPs). The microarrays are subsequently scanned in the iScan system, providing us with information about the genetic variability between large-scale populations, as well as susceptibility to disease-causal variants.

Genotyping by microarrays are available for a great varieties of analysis which could be:

  • Whole genome genotyping.
  • Customized microarrays
  • Genetic prediction
  • Study of agricultural and agronomic variants
  • GWAS studies
  • Disease detection
  • Study of rare variants
  • Support in quality control processes
  • Forensic analysis

Available Arrays.
HUMANOCANINEBOVINEOVINEPORCINESHRIMPMAIZECUSTOMIZED ANALYSIS

Infinium Core-24 KIT
The Infinium Core-24 BeadChip is based upon the trusted Infinium assay. Using the proven iScan System, this 24-sample BeadChip combines affordability with high-throughput sample processing to deliver high-quality, genome-wide information.

Infinium CoreExome-24 KIT
The Infinium CoreExome-24 BeadChips use the Infinium high-throughput screening (HTS) 24-sample format, enabling high content flexibility, throughput capacity, and genotyping accuracy. When combined with the proven iScan System, these BeadChips deliver affordable, high-quality, genome-wide information across diverse world populations.

Infinium Exome-24 KIT
Infinium Exome-24 BeadChip delivers focused coverage of exonic regions, but does not include coverage outside of coding regions.

Infinium Global Screening Array-24 v1.0 Kit
The Infinium Global Screening Array-24 v1.0 BeadChip combines multi-ethnic genome-wide content, curated clinical research variants, and quality control (QC) markers for precision medicine research.

Infinium InmunoArray-24 v2 BeadChip Kit
The Infinium ImmunoArray-24 v2 BeadChip is the next-generation genotyping array for detecting genetic variation in the human immune system. This BeadChip includes the most valuable content from the HumanImmuno v1 BeadChip, supplemented with newly selected content produced by the immunology research community.

InfiniumMethylationEPIC Kit
With the Infinium MethylationEPIC BeadChip Kit, researchers can interrogate over 850,000 methylation sites quantitatively across the genome at single-nucleotide resolution. Multiple samples, including FFPE, can be analyzed in parallel to deliver high-throughput power while minimizing the cost per sample.

Infinium multi-Ethinic AMR/AFR-8 Kit
The Infinium Multi-Ethnic AMR/AFR-8 Kit provides a multi-purpose, multi-ethnic genotyping array focused on Hispanic and African American populations. With > 1.4 million expertly selected markers, it enables identification of genetic associations with common and rare traits, providing insight to epidemiologists, health care researchers, population geneticists, and genomic researchers.

Infinium multi-Ethinic EUR/EAS/SAS-8 Kit
The Infinium Multi-Ethnic EUR/EAS/SAS-8 Kit provides a multi-purpose, multi-ethnic genotyping array focused on European, East Asian, and South Asian populations. With > 1.4 million expertly selected markers, it enables identification of genetic associations with common and rare traits, providing insight to epidemiologists, health care researchers, population geneticists, and genomic researchers.

Infinium multi-Ethinic Global-8 Kit
The Infinium Multi-Ethnic Global-8 Kit provides a true multi-purpose, multi-ethnic genotyping array. With > 1.7 million expertly selected markers, it enables identification of genetic associations with common and rare traits, providing insight across diverse populations to epidemiologists, health care researchers, population geneticists, and genomic researchers.

Infinium Omni2.5-8 Kit
This 8-sample BeadChip array features ~2.5 million markers, with custom marker add-on capability, and delivers exceptional genomic coverage rates across diverse populations. The Infinium Omni2.5-8 BeadChip offers an optimal and comprehensive set of both common and rare SNP content from the 1000 Genomes Project (MAF>2.5%) for diverse world populations.

Infinium Omni2.5Exome-8 Kit
The Infinium Omni2.5Exome-8 BeadChip array delivers comprehensive coverage of common, rare, and exonic SNP content from the 1000 Genomes Project (1kGP)1, providing maximum genomic information of diverse world populations.

Infinium Omni5-4Kit
The Infinium Omni5-4 BeadChip delivers comprehensive coverage of the genome, leveraging powerful tagSNPs selected from the International HapMap and 1000 Genomes Projects that target genetic variation down to 1% minor allele frequency (MAF).

Infinium Omni5Exome-4 Kit
This BeadChip array covers > 4.3 million whole-genome variants down to 1% minor allele frequency (MAF), plus novel functional exonic variants.

Infinium OmniExpress-24 Kit
This 24-sample BeadChip array offers exceptional throughput of thousands of samples per week, enabling powerful human genome-wide association studies (GWAS).

Infinium OmniExpressExome-8 Kit
Discover novel trait and disease associations with optimized tag SNPs and functional exonic content at an attractive price.

Infinium OmniZhonHua-8 Kit
Advance your Chinese population GWAS. This microarray provides coverage of common, intermediate, and rare variation specific to Chinese populations.

Infinium OncoArray-500K BeadChip
This comprehensive, high-density microarray kit enables research into cancer predisposition and risk.

Infinium PsychArray-24 Kit
A cost-effective, high-density Illumina microarray for large-scale genetic studies focused on psychiatric predisposition and risk.

Infinium QC Array-24 Kit
High-throughput, cost-effective genotyping for quality control, tracking, and stratification applications including biobanking.

CanineHD Whole-Genome Genotyping BeadChip
This array enables genotyping of any domestic dog breed, and offers ample SNP density for within-breed association and CNV studies.

BovineHD DNA Analysis Kit
This comprehensive genome-wide bovine genotyping array kit features over 777,000 SNPs, and is compatible with any breed of beef or dairy cattle.

BovineLD Genotyping BeadChip
Delivering superior, scalable content at an economical price, is a robust imputation tool for global dairy breeds, extending genomic selection to the entire herd.

BovineSNP50 v3 DNA Analysis BeadChip
This BeadChip microarray provides high-density multi-sample bovine genotyping for genome characterization of major dairy and beef cattle breed types..

OvineSNP50 DNA Analysis Kit
This array features over 54,241 evenly spaced SNP probes for genome-wide association studies, genome-wide selection, and genetic merit determination.

PorcineSNP60 DNA Analysis Kit v2
This 24-sample genome-wide genotyping array detects over 64,000 evenly distributed SNPs for genetic variation analysis of multiple porcine breeds.

Infinium ShrimpLD-24 BeadChip
This BeadChip microarray offers a high-powered genotyping solution to advance aquaculture breeding programs of Pacific white shrimp.

MaizeLD BeadChip Kit
Content for essentially derived varieties assessment and maize breeding applications. Samples used include the Plant Variety Protection Act panel.

MaizeSNP50 DNA Analysis Kit
This array enables genetic variation analysis across maize lines. It includes over 50,000 validated markers derived from the B73 corn reference sequence.

Infinium XT
Infinium XT is a comprehensive microarray solution that enables production-scale genotyping of up to 50,000 single or multi-species custom variants.

Infinium iSelect HD and HTS Custom Genotyping BeadChips
Interrogate virtually any target across any species to create a fully-customized genotyping array tailored to your unique study needs.


Microarray Applications

Description of the Service
  • Quantification of DNA by fluorescence.
  • Evaluation of the integrity of the genetic material provided.
  • Processing of the simples for genotyping according to the Illumina Infinitum protocol.
  • Scanning of the arrays using the iScan system.
  • Data delivery (SNPs and identifiers in EXCEL-MS format) plus unfiltered ".ped" and ".map" files .
At Labsergen we offer the service of extraction of genetic material from both plants and humans (saliva), so if you require the additional service you can request more information about it



Service Request Format

Pricing and Contact

For personalized attention, more information about the service and quote, please contact:

IA. María de Jesús Ortega Estrada
maria.ortega@cinvestav.mx
Phone +52 (462) 166-3000 Ext(s). 3126, 3024.

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